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Distinct Conformation of ATP Molecule in Solution and on Protein
Eri Kobayashi1, Kei Yura1,2,3, Yoshinori Nagai4
1Graduate School of Humanities and Sciences, Ochanomizu University, 2Center for Informational Biology, Ochanomizu University, 3Center for Simulation Sciences, Ochanomizu University, 4Faculty of Political Science and Economics, Kokushikan University
BIOPHYSICS 9 1-12, 2013.
1Graduate School of Humanities and Sciences, Ochanomizu University, 2Center for Informational Biology, Ochanomizu University, 3Center for Simulation Sciences, Ochanomizu University, 4Faculty of Political Science and Economics, Kokushikan University
BIOPHYSICS 9 1-12, 2013.
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Single turnovers of fluorescent ATP bound to bipolar myosin filament during actin filaments sliding
Takahiro Maruta, Takahiro Kobatake, Hiroyuki Okubo, Shigeru Chaen
Department of Integrated Sciences in Physics and Biology, College of Humanities and Sciences, Nihon University
BIOPHYSICS 9 13-20, 2013.
Department of Integrated Sciences in Physics and Biology, College of Humanities and Sciences, Nihon University
BIOPHYSICS 9 13-20, 2013.
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Expression, purification and biochemical characterization of the cytoplasmic loop of PomA, a stator component of the Na+ driven flagellar motor
Rei Abe-Yoshizumi1), Shiori Kobayashi1), Mizuki Gohara1), Kokoro Hayashi2), Chojiro Kojima2), Seiji Kojima1), Yuki Sudo1), Yasuo Asami3), Michio Homma1)
1)Division of Biological Science, Graduate School of Science, Nagoya University, 2)Laboratory of Biophysics, Graduate School of Biological Sciences, Nara Institute of Science and Technology, 3)TA Instruments Japan
BIOPHYSICS 9 21-29, 2013.
1)Division of Biological Science, Graduate School of Science, Nagoya University, 2)Laboratory of Biophysics, Graduate School of Biological Sciences, Nara Institute of Science and Technology, 3)TA Instruments Japan
BIOPHYSICS 9 21-29, 2013.
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Mechanism of the nucleotidyl-transfer reaction in DNA polymerase revealed by time-resolved protein crystallography
Teruya Nakamura1),2), Ye Zhao2),3), Yuriko Yamagata1), Yue-jin Hua3), Wei Yang2)
1)Graduate School of Pharmaceutical Sciences, Kumamoto University, 2)Laboratory of Molecular Biology, National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, 3)Institute of Nuclear-Agricultural Sciences, Zhejiang University
BIOPHYSICS 9 31-36, 2013.
1)Graduate School of Pharmaceutical Sciences, Kumamoto University, 2)Laboratory of Molecular Biology, National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, 3)Institute of Nuclear-Agricultural Sciences, Zhejiang University
BIOPHYSICS 9 31-36, 2013.
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Characterization of the ordered phase formed by sphingomyelin analogues and cholesterol binary mixtures
Masanao Kinoshita1),2), Sarah Goretta3), Hiroshi Tsuchikawa3), Nobuaki Matsumori1),3), Michio Murata1),2),3)
1)JST ERATO, Lipid Active Structure Project, Osaka University, 2)Project Research Center for Fundamental Science, Osaka University, 3)Department of Chemistry, Graduate School of Science, Osaka University
BIOPHYSICS 9 37-49, 2013.
1)JST ERATO, Lipid Active Structure Project, Osaka University, 2)Project Research Center for Fundamental Science, Osaka University, 3)Department of Chemistry, Graduate School of Science, Osaka University
BIOPHYSICS 9 37-49, 2013.
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Rotary catalysis of F0F1-ATP synthase
Rikiya Watanabe
Department of Applied Chemistry, School of Engineering, The University of Tokyo
BIOPHYSICS 9 51-56, 2013.
Department of Applied Chemistry, School of Engineering, The University of Tokyo
BIOPHYSICS 9 51-56, 2013.
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Crystal structure of channelrhodopsin, a light-gated cation channel - all cations lead through the monomer -
Hideaki E.Kato, Osamu Nureki
Department of Biophysics and Biochemistry, Graduate School of Science, The University of Tokyo
BIOPHYSICS 9 57-61, 2013.
Department of Biophysics and Biochemistry, Graduate School of Science, The University of Tokyo
BIOPHYSICS 9 57-61, 2013.
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Role of the Dc domain of the bacterial hook protein FlgE in hook assembly and function
Nao Moriya1), Tohru Minamino1), Hedda U.Ferris2), Yusuke V.Morimoto1),3), Masamichi Ashihara1), Takayuki Kato1), Keiichi Namba1),3)
1)Graduate School of Frontier Biosciences, Osaka University, 2)Department of Molecular Biophysics and Biochemistry, Yale University, 3)Riken Quantitative Biology Center
BIOPHYSICS 9 63-72, 2013.
1)Graduate School of Frontier Biosciences, Osaka University, 2)Department of Molecular Biophysics and Biochemistry, Yale University, 3)Riken Quantitative Biology Center
BIOPHYSICS 9 63-72, 2013.
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Responses of chromosome segregation machinery to mechanical perturbations
Takeshi Itabashi1), Jun Takagi1), Kazuya Suzuki1), Shin'ichi Ishiwata1),2)
1)Department of Physics, Faculty of Science and Engineering, Waseda University, 2)Waseda Bioscience Research Institute in Singapore (WABIOS)
BIOPHYSICS 9 73-78, 2013.
1)Department of Physics, Faculty of Science and Engineering, Waseda University, 2)Waseda Bioscience Research Institute in Singapore (WABIOS)
BIOPHYSICS 9 73-78, 2013.
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A new approach to detect small peptides clearly and sensitively by Western blotting using a vacuum-assisted detection method
Satoshi Tomisawa, Chiharu Abe, Masakatsu Kamiya, Takashi Kikukawa, Makoto Demura, Keiichi Kawano, Tomoyasu Aizawa
Faculty of Advanced Life Science, Hokkaido University
BIOPHYSICS 9 79-83, 2013.
Faculty of Advanced Life Science, Hokkaido University
BIOPHYSICS 9 79-83, 2013.
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Contribution of a visual pigment absorption spectrum to a visual function : depth perception in a jumping spider
Takashi Nagata1), Kentaro Arikawa1), Akihisa Terakita2)
1)Laboratory of Neuroethology, The Graduate University for Advanced Studies (Sokendai), 2)Department of Biology and Geosciences, Graduate School of Science, Osaka City University
BIOPHYSICS 9 85-89, 2013.
1)Laboratory of Neuroethology, The Graduate University for Advanced Studies (Sokendai), 2)Department of Biology and Geosciences, Graduate School of Science, Osaka City University
BIOPHYSICS 9 85-89, 2013.
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Experimental thermodynamics of single molecular motor
Shoichi Toyabe1), Eiro Muneyuki2)
1)Systems Biophysics, Faculty of Physics, Ludwig-Maximilians-University Munich, 2)Department of Physics, Faculty of Science and Engineering, Chuo University
BIOPHYSICS 9 91-98, 2013.
1)Systems Biophysics, Faculty of Physics, Ludwig-Maximilians-University Munich, 2)Department of Physics, Faculty of Science and Engineering, Chuo University
BIOPHYSICS 9 91-98, 2013.
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Difference in hydration structures between F-actin and myosin subfragment-1 detected by small-angle X-ray and neutron scattering
Tatsuhito Matsuo1), Toshiaki Arata2), Toshiro Oda3), Satoru Fujiwara1)
1)Quantum Beam Science Directorate, Japan Atomic Energy Agency, 2)Department of Biological Sciences, Graduate School of Science, Osaka University, 3)RIKEN SPring-8 Center, RIKEN Harima Institute
BIOPHYSICS 9 99-106, 2013.
1)Quantum Beam Science Directorate, Japan Atomic Energy Agency, 2)Department of Biological Sciences, Graduate School of Science, Osaka University, 3)RIKEN SPring-8 Center, RIKEN Harima Institute
BIOPHYSICS 9 99-106, 2013.
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Information-to-free-energy conversion : Utilizing thermal fluctuations
Shoichi Toyabe1), Eiro Muneyuki2)
1)Systems Biophysics, Faculty of Physics, Ludwig-Maximilians-University Munich, 2)Department of Physics, Faculty of Science and Engineering, Chuo University
BIOPHYSICS 9 107-112, 2013.
1)Systems Biophysics, Faculty of Physics, Ludwig-Maximilians-University Munich, 2)Department of Physics, Faculty of Science and Engineering, Chuo University
BIOPHYSICS 9 107-112, 2013.
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LigandBox : A database for 3D structures of chemical compounds
Takeshi Kawabata1), Yusuke Sugihara2), Yoshifumi Fukunishi3), Haruki Nakamura1)
1)Institute for Protein Research, Osaka University, 2)Fujitsu Kyushu R&D Center, Life Science Systems Dept., Fujitsu Kyushu Systems Limited, 3)Molecular Profiling Research Center for Drug Discovery (molprof)
BIOPHYSICS 9 113-121, 2013.
1)Institute for Protein Research, Osaka University, 2)Fujitsu Kyushu R&D Center, Life Science Systems Dept., Fujitsu Kyushu Systems Limited, 3)Molecular Profiling Research Center for Drug Discovery (molprof)
BIOPHYSICS 9 113-121, 2013.
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Development of a rapid Buffer-exchange system for time-resolved ATR-FTIR spectroscopy with the step-scan mode
Yuji Furutani1),2), Tetsunari Kimura1),2), Kido Okamoto3)
1)Department of Life and Coordination-Complex Molecular Science, Institute for Molecular Science, 2)Department of Structural Molecular Science, The Graduate University for Advanced Studies (SOKENDAI), 3)UNISOKU Co.,Ltd.
BIOPHYSICS 9 123-129, 2013.
1)Department of Life and Coordination-Complex Molecular Science, Institute for Molecular Science, 2)Department of Structural Molecular Science, The Graduate University for Advanced Studies (SOKENDAI), 3)UNISOKU Co.,Ltd.
BIOPHYSICS 9 123-129, 2013.
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Recent structural studies on Dom34/aPelota and Hbs1/aEF1α : important factors for solving general problems of ribosomal stall in translation
Kan Kobayashi, Ryuichiro Ishitani, Osamu Nureki
Department of Biophysics and Biochemistry, Graduate School of Science, The University of Tokyo
BIOPHYSICS 9 131-140, 2013.
Department of Biophysics and Biochemistry, Graduate School of Science, The University of Tokyo
BIOPHYSICS 9 131-140, 2013.
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3D structure of eukaryotic flagella/cilia by cryo-electron tomography
Takashi Ishikawa
Laboratory of Biomolecular Research, Paul Scherrer Institute
BIOPHYSICS 9 141-148, 2013.
Laboratory of Biomolecular Research, Paul Scherrer Institute
BIOPHYSICS 9 141-148, 2013.
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Single molecule FRET observation of kinesin-1's head-tail interaction on microtubule
Takahiro Aoki, Michio Tomishige, Takayuki Ariga
Department of Applied Physics, School of Engineering, the University of Tokyo
BIOPHYSICS 9 149-159, 2013.
Department of Applied Physics, School of Engineering, the University of Tokyo
BIOPHYSICS 9 149-159, 2013.
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Increase in cyclic AMP concentration in a cerebral giant interneuron mimics part of a memory trace for conditioned taste aversion of the pond snail
Emi Otsuka1), Miho Matsunaga1), Ryuichi Okada1), Miki Yamagishi1), Akiko Okuta2), Ken Lukowiak3), Etsuro Ito1)
1)Kagawa School of Pharmaceutical Sciences, Tokushima Bunri University, 2)Cellular and Structural Physiology Institute, Nagoya University, 3)Hotchkiss Brain Institute, University of Calgary
BIOPHYSICS 9 161-166, 2013.
1)Kagawa School of Pharmaceutical Sciences, Tokushima Bunri University, 2)Cellular and Structural Physiology Institute, Nagoya University, 3)Hotchkiss Brain Institute, University of Calgary
BIOPHYSICS 9 161-166, 2013.
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Detection of a protein-bound water vibration of halorhodopsin in aqueous solution
Tetsuya Fukuda, Kosuke Muroda, Hideki Kandori
Department of Frontier Materials, Nagoya Institute of Technology
BIOPHYSICS 9 167-172, 2013.
Department of Frontier Materials, Nagoya Institute of Technology
BIOPHYSICS 9 167-172, 2013.
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The C-terminal periplasmic domain of MotB is responsible for load-dependent control of the number of stators of the bacterial flagellar motor
David J.Castillo1), Shuichi Nakamura2), Yusuke V.Morimoto1),3), Yong-Suk Che4), Nobunori Kami-ike1), Seishi Kudo2), Tohru Minamino1), Keiichi Namba1),3)
1)Graduate School of Frontier Biosciences, Osaka University, 2)Department of Applied Physics, Tohoku University, 3)Quantitative Biology Center, RIKEN, 4)Department of Frontier Bioscience, Hosei University
BIOPHYSICS 9 173-181, 2013.
1)Graduate School of Frontier Biosciences, Osaka University, 2)Department of Applied Physics, Tohoku University, 3)Quantitative Biology Center, RIKEN, 4)Department of Frontier Bioscience, Hosei University
BIOPHYSICS 9 173-181, 2013.
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Physical aspects of sensory transduction on seeing, hearing and smelling
Tohru Yoshioka1), Manabu Sakakibara2)
1)Waseda University, Graduate Institute of Medicine, Kaohsiung Medical University, 2)Tokai University, School of High-Technology for Human Welfare
BIOPHYSICS 9 183-191, 2013.
1)Waseda University, Graduate Institute of Medicine, Kaohsiung Medical University, 2)Tokai University, School of High-Technology for Human Welfare
BIOPHYSICS 9 183-191, 2013.
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