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	Switching of the positive feedback for RAS activation by a concerted function of SOS membrane association domains Yuki Nakamura1,2, Kayo Hibino3, Toshio Yanagida2, Yasushi Sako1,2 Biophysics and Physicobiology 13: 1-11, 2016.

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	Genetic analysis of revertants isolated from the rod-fragile fliF mutant of Salmonella Hitomi Komatsu1, Fumio Hayashi2, Masahiro Sasa3, Koji Shikata3, Shigeru Yamaguchi4, Keiichi Namba1,5, Kenji Oosawa1,2,3 Biophysics and Physicobiology 13: 13-25, 2016.

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	Density functional study of molecular interactions in secondary structures of proteins Yu Takano1,2,3, Ayumi Kusaka1, Haruki Nakamura1 Biophysics and Physicobiology 13: 27-35, 2016.

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	Operating principles of rotary molecular motors : differences between F1 and V1 motors Ichiro Yamato1, Yoshimi Kakinuma2, Takeshi Murata3,4,5 Biophysics and Physicobiology 13: 37-44, 2016.

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	A unified statistical model of protein multiple sequence alignment integrating direct coupling and insertions Akira R.Kinjo1 Biophysics and Physicobiology 13: 45-62, 2016.

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	Chaperonin GroEL uses asymmetric and symmetric reaction cycles in response to the concentration of non-native substrate proteins Ryo Iizuka1, Takashi Funatsu1 Biophysics and Physicobiology 13: 63-69, 2016.

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	Cation-limited kinetic model for microbial extracellular electron transport via an outer membrane cytochrome C complex Akihiro Okamoto1,2, Yoshihide Tokunou2, Junki Saito2 Biophysics and Physicobiology 13: 71-76, 2016.

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	Molecular mechanisms of substrate specificities of uridine-cytidine kinase Wataru Tanaka1, Mitsuo Shoji1,2, Fumiaki Tomoike3, Yuzuru Ujiie1, Kyohei Hanaoka1, Ryuhei Harada1, Megumi Kayanuma1,2, Katsumasa Kamiya4, Toyokazu Ishida5, Ryoji Masui6,7, Seiki Kuramitsu6, Yasuteru Shigeta1,2 Biophysics and Physicobiology 13: 77-84, 2016.

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	Preface of Special Issue "Protein-Ligand Interactions" Kei Yura1,2,3 Biophysics and Physicobiology 13: 85-86, 2016.

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	Mass spectrometric analysis of protein-ligand interactions Kentaro Ishii1, Masanori Noda2, Susumu Uchiyama1,2 Biophysics and Physicobiology 13: 87-95, 2016.

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	Determination of locked interfaces in biomolecular complexes using Haptimol_RD Georgios Iakovou1, Stephen Laycock1, Steven Hayward1 Biophysics and Physicobiology 13: 97-103, 2016.

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	Specificity of broad protein interaction surfaces for proteins with multiple binding partners Nobuyuki Uchikoga1, Yuri Matsuzaki2, Masahito Ohue3, Yutaka Akiyama2,3 Biophysics and Physicobiology 13: 105-115, 2016.

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	Dynamic profile analysis to characterize dynamics-driven allosteric sites in enzymes Junko Taguchi1, Akio Kitao2 Biophysics and Physicobiology 13: 117-126, 2016.

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	Conformational shift in the closed state of GroEL induced by ATP-binding triggers a transition to the open state Yuka Suzuki1,5, Kei Yura2,3,4 Biophysics and Physicobiology 13: 127-134, 2016.

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	Effects of substrate conformational strain on binding kinetics of catalytic antibodies Masayuki Oda1, Takeshi Tsumuraya2, Ikuo Fujii2 Biophysics and Physicobiology 13: 135-138, 2016.

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	Effects of the difference in similarity measures on the comparison of ligand-binding pockets using a reduced vector representation of pockets Tsukasa Nakamura1,2, Kentaro Tomii1,2,3 Biophysics and Physicobiology 13: 139-147, 2016.

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	Importance of consensus region of multiple-ligand templates in a virtual screening method Tatsuya Okuno1,2, Koya Kato3, Shintaro Minami4, Tomoki P. Terada3, Masaki Sasai3, George Chikenji3 Biophysics and Physicobiology 13: 149-156, 2016.

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	Structural characterization of single nucleotide variants at ligand binding sites and enzyme active sites of human proteins Kazunori D. Yamada1, Hafumi Nishi1, Junichi Nakata2, Kengo Kinoshita1,2,3 Biophysics and Physicobiology 13: 157-163, 2016.

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	Amino acid residues of bitter taste receptor TAS2R16 that determine sensitivity in primates to β-glycosides Hiroo Imai1, Nami Suzuki-Hashido1, Yoshiro Ishimaru2, Takanobu Sakurai2, Lijie Yin3, Wenshi Pan3, Masaji Ishiguro4, Katsuyoshi Masuda5, Keiko Abe2, Takumi Misaka2, Hirohisa Hirai1 Biophysics and Physicobiology 13: 165-171, 2016.

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	In silico studies for the interaction of tumor necrosis factor-alpha (TNF-α) with different saponins from Vietnamese ginseng (Panax vietnamensis) Oanh T. P. Kim1, Manh D. Le2, Hoang X. Trinh2, Hai V. Nong1 Biophysics and Physicobiology 13: 173-180, 2016.

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	Molecular dynamics analysis to evaluate docking pose prediction Takako Sakano1, Md. Iqbal Mahamood1, Takefumi Yamashita1, Hideaki Fujitani1 Biophysics and Physicobiology 13: 181-194, 2016.

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	Metabolic pathway reconstruction strategies for central metabolism and natural product biosynthesis Masaaki Kotera1, Susumu Goto2 Biophysics and Physicobiology 13: 195-205, 2016.

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	myPresto/omegagene : a GPU-accelerated molecular dynamics simulator tailored for enhanced conformational sampling methods with a non-Ewald electrostatic scheme Kota Kasahara1, Benson Ma2, Kota Goto3, Bhaskar Dasgupta4,5, Junichi Higo4, Ikuo Fukuda4, Tadaaki Mashimo5, Yutaka Akiyama3,6, Haruki Nakamura4 Biophysics and Physicobiology 13: 209-216, 2016.

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	Model simulation of the SPOC wave in a bundle of striated myofibrils Koutaro Nakagome1, Katsuhiko Sato2, Seine A.Shintani3, Shin'ichi Ishiwata1 Biophysics and Physicobiology 13: 217-226, 2016.

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	Domain-based biophysical characterization of the structural and thermal stability of FliG, an essential rotor component of the Nat-driven flagellar motor Yasuhiro Onoue1, Rei Abe-Yoshizumi†,1, Mizuki Gohara1, Yuuki Nishino1, Shiori Kobayashi1, Yasuo Asami2, Michio Homma1 Biophysics and Physicobiology 13: 227-233, 2016.

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	Accelerating in vitro studies on circadian clock systems using an automated sampling device Yoshihiko Furuike1,2, Jun Abe1, Atsushi Mukaiyama1,2, Shuji Akiyama1,2 Biophysics and Physicobiology 13: 235-241, 2016.

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	Memorial Issue for Professor Nobuhiko Saito Kei Yura1,2,3, Hiroshi Wako4 Biophysics and Physicobiology 13: 243-243, 2016.

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	Obituary : Nobuhiko Saito, a man who understood protein folding in his own way Kei Yura1,2 Biophysics and Physicobiology 13: 245-247, 2016.

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	Professor Nobuhiko Saito's contribution to statistical mechanics of biopolymers Mitiko Go1,2 Biophysics and Physicobiology 13: 249-250, 2016.

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	Statistical mechanics of protein structural transitions : Insights from the island model Yukio Kobayashi1 Biophysics and Physicobiology 13: 251-262, 2016.

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	Characterization of protein folding by a Φ-value calculation with a statistical-mechanical model Hiroshi Wako1, Haruo Abe2 Biophysics and Physicobiology 13: 263-279, 2016.

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	Cooperativity and modularity in protein folding Masaki Sasai1, George Chikenji1, Tomoki P.Terada1 Biophysics and Physicobiology 13: 281-293, 2016.

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	Itinerary profiling to analyze a large number of protein-folding trajectories Motonori Ota1, Mitsunori Ikeguchi2, Akinori Kidera2 Biophysics and Physicobiology 13: 295-304, 2016.

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	What parameters characterize "life"? Shigeki Mitaku1, Ryusuke Sawada2 Biophysics and Physicobiology 13: 305-310, 2016.

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	Theoretical analyses on a flipping mechanism of UV-induced DNA damage Ryuma Sato1, Ryuhei Harada1, Yasuteru Shigeta1 Biophysics and Physicobiology 13: 311-319, 2016.

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	Actin binding domain of filamin distinguishes posterior from anterior actin filaments in migrating Dictyostelium cells Keitaro Shibata1,4, Akira Nagasaki1, Hiroyuki Adachi2, Taro Q.P.Uyeda1,3 Biophysics and Physicobiology 13: 321-331, 2016.

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