Search by Journal

Biophysics and Physicobiology

Volume 19, Issue / 2022
English Article   Japanese Article
  • Please note that metadata of J-type articlesare generated by machine-translation and the original texts are written in Japanese.

English Article Structural diversity of cysteine desulfurases involved in iron-sulfur cluster biosynthesis
Takashi Fujishiro, Ryosuke Nakamura, Kouhei Kunichika, Yasuhiro Takahashi
Biophysics and Physicobiology 19: e190001-1-e190001-18, 2022.

English Article Information quantity for secondary structure propensities of protein subsequences in the Protein Data Bank
Ryohei Kondo1, Kota Kasahara2, Takuya Takahashi2
Biophysics and Physicobiology 19: e190002-1-e190002-12, 2022.

English Article Ionic strength-sensitive and pH-insensitive interactions between C-reactive protein (CRP) and an anti-CRP antibody
Yuka Oka1, Shota Ushiba1, Naruto Miyakawa1, Madoka Nishio1, Takao Ono2,3, Yasushi Kanai2, Yohei Watanabe4, Shinsuke Tani1, Masahiko Kimura1, Kazuhiko Matsumoto2
Biophysics and Physicobiology 19: e190003_1-e190003_9, 2022.

English Article A variety of photoreceptors and the frontiers of optogenetics
Satoru Tokutomi1,2,3, Satoshi P. Tsunoda4
Biophysics and Physicobiology 19: e190004_1-e190004_3, 2022.

English Article How evolution builds up complexity? : In vitro evolution approaches to witness complexification in artificial molecular replication systems
Taro Furubayashi1,2, Norikazu Ichihashi3,4,5
Biophysics and Physicobiology 19: e190005_1-e190005_10, 2022.

English Article Quantitative and kinetic single-molecule analysis of DNA unwinding by Escherichia coli UvrD helicase
Hiroaki Yokota
Biophysics and Physicobiology 19: e190006_1-e190006_16, 2022.

English Article Triple-color single-molecule imaging for analysis of the role of receptor oligomers in signal transduction
Hideaki Yoshimura
Biophysics and Physicobiology 19: e190007_1-e190007_9, 2022.

English Article Slow and temperature-compensated autonomous disassembly of KaiB-KaiC complex
Damien Simon1,2, Atsushi Mukaiyama1,2, Yoshihiko Furuike1,2, Shuji Akiyama1,2
Biophysics and Physicobiology 19: e190008_1-e190008_11, 2022.

English Article Current status of neutron crystallography in structural biology
Fumiaki Kono, Kazuo Kurihara, Taro Tamada
Biophysics and Physicobiology 19: e190009_1-e190009_10, 2022.

English Article Molecular dynamics simulations of amyloid-β peptides in heterogeneous environments
Yuhei Tachi1,2, Satoru G. Itoh2,3,4, Hisashi Okumura2,3,4
Biophysics and Physicobiology 19: e190010_1-e190010_18, 2022.

English Article Phenotypic systems biology for organisms : Concepts, methods and case studies
Takao K. Suzuki
Biophysics and Physicobiology 19: e190011_1-e190011_17, 2022.

English Article Mathematical model of chromosomal dynamics during DNA double strand break repair in budding yeast
Shinjiro Nakahata1, Tetsushi Komoto1, Masashi Fujii1, Akinori Awazu1,2
Biophysics and Physicobiology 19: e190012_1-e190012_12, 2022.

English Article Recent advances in single-molecule spectroscopy studies on light-harvesting processes in oxygenic photosynthesis
Toru Kondo1,2, Yutaka Shibata3
Biophysics and Physicobiology 19: e190013_1-e190013_16, 2022.

English Article Dorsolateral prefrontal cortex sensing analgesia
Etsuro Ito1,3,4, Kotaro Oka2,3,4, Fusako Koshikawa5
Biophysics and Physicobiology 19: e190014_1-e190014_10, 2022.

English Article Coarse-grained molecular dynamics simulations of base-pair mismatch recognition protein MutS sliding along DNA
Keisuke Inoue, Shoji Takada, Tsuyoshi Terakawa
Biophysics and Physicobiology 19: e190015_1-e190015_16, 2022.

English Article Practical considerations for feature assignment in high-speed AFM of live cell membranes
Damien Hall1,2, Adam S.Foster1,2
Biophysics and Physicobiology 19: e190016_1-e190016_21, 2022.

English Article Multistep growth of amyloid intermediates and its inhibition toward exploring therapeutic way : A case study using insulin B chain and fibrinogen
Naoki Yamamoto1, Eri Chatani2
Biophysics and Physicobiology 19: e190017_1-e190017_10, 2022.

English Article Epigenetic-structural changes in X chromosomes promote Xic pairing during early differentiation of mouse embryonic stem cells
Tetsushi Komoto1, Masashi Fujii1, Akinori Awazu1,2
Biophysics and Physicobiology 19: e190018_1-e190018_14, 2022.

English Article Structures of oxygen dissociation intermediates of 400 kDa V2 hemoglobin provide coarse snapshots of the protein allostery
Nobutaka Numoto1, Seiko Onoda2, Yoshiaki Kawano3, Hideo Okumura4, Seiki Baba4, Yoshihiro Fukumori5, Kunio Miki6, Nobutoshi Ito1
Biophysics and Physicobiology 19: e190019_1-e190019_10, 2022.

English Article Exploring order in active turbulence: Geometric rule and pairing order transition in confined bacterial vortices
Kazusa Beppu, Yusuke T. Maeda
Biophysics and Physicobiology 19: e190020_1-e190020_9, 2022.

English Article Diverse reactions catalyzed by cytochrome P450 and biosynthesis of steroid hormone
Keisuke Fujiyama1, Tomoya Hino2,3, Shingo Nagano2,3
Biophysics and Physicobiology 19: e190021_1-e190021_16, 2022.

English Article Structural overview of the translocase of the mitochondrial outer membrane complex
Yuhei Araiso1, Toshiya Endo2,3
Biophysics and Physicobiology 19: e190022_1-e190022_9, 2022.

English Article Current status and future perspectives of the evaluation of missense variants by using three-dimensional structures of proteins
Matsuyuki Shirota1,2, Kengo Kinoshita2,3
Biophysics and Physicobiology 19: e190023_1-e190023_7, 2022.

English Article Biophysical elucidation of neural network and chemical regeneration of neural tissue
Takahiro Muraoka1,2, Tomohide Saio3, Masaki Okumura4
Biophysics and Physicobiology 19: e190024_1-e190024_2, 2022.

English Article Computational study of the impact of nucleotide variations on highly conserved proteins : In the case of actin
Ha T.T.Duong1,2, Hirofumi Suzuki3, Saki Katagiri1, Mayu Shibata1, Misae Arai1, Kei Yura1,3,4
Biophysics and Physicobiology 19: e190025_1-e190025_10, 2022.

English Article Simple dynamics underlying the survival behaviors of ciliates
Takuya Ohmura1, Yukinori Nishigami2, Masatoshi Ichikawa3
Biophysics and Physicobiology 19: e190026_1-e190026_10, 2022.

English Article Molecular dynamics analysis of biomolecular systems including nucleic acids
Takeru Kameda1,2,3, Akinori Awazu4,5, Yuichi Togashi1,4,5,6,7
Biophysics and Physicobiology 19: e190027_1-e190027_18, 2022.

English Article Phase separation by biopolymers : Basics and applications
Ryo Kitahara1, Tomoshi Kameda2
Biophysics and Physicobiology 19: e190028_1-e190028_2, 2022.

English Article A five-course meal symposium on "The Future of Muscle is Now"
Madoka Suzuki1, Kotaro Oyama2
Biophysics and Physicobiology 19: e190029_1-e190029_3, 2022.

English Article Japan-US symposium on motor proteins and associated single-molecule biophysics
Kumiko Hayashi1, Jakia Jannat Keya2,3
Biophysics and Physicobiology 19: e190030_1-e190030_3, 2022.

English Article Uncovering the design principles of supramolecular assemblies through manipulation of the structures, dynamics, and functions
Makito Miyazaki1,2,3,4, Takahiro Kosugi4,5,6,7
Biophysics and Physicobiology 19: e190031_1-e190031_3, 2022.

English Article Zero-mode waveguides and nanopore-based sequencing technologies accelerate single-molecule studies
Ryo Iizuka, Hirohito Yamazaki, Sotaro Uemura
Biophysics and Physicobiology 19: e190032_1-e190032_19, 2022.

English Article Participation in 44th Indian Biophysical Society Meeting
Kayo Hibino1,2,3
Biophysics and Physicobiology 19: e190033_1-e190033_2, 2022.

English Article Quantum nanodiamonds for sensing of biological quantities : Angle, temperature, and thermal conductivity
Shingo Sotoma1, Hirotaka Okita1, Shunsuke Chuma1,2, Yoshie Harada1,3
Biophysics and Physicobiology 19: e190034_1-e190034_15, 2022.

English Article Protein large-scale motions revealed by quantum beams : A new era in understanding protein dynamics
Naoki Yamamoto1, Rintaro Inoue2, Ikuo Kurisaki3, Tatsuhito Matsuo4, Yuki Hishikawa5, Wenyang Zhao6, Hiroshi Sekiguchi7
Biophysics and Physicobiology 19: e190035_1-e190035_4, 2022.

English Article Interplay among cell migration, shaping, and traction force on a matrix with cell-scale stiffness heterogeneity
Hiroyuki Ebata1, Satoru Kidoaki2
Biophysics and Physicobiology 19: e190036_1-e190036_16, 2022.

English Article Standardization of luminescence, fluorescence measurements, and light microscopy : Current situation and perspectives
Akira Sasaki1, Yoshihiro Ohmiya2,3
Biophysics and Physicobiology 19: e190037_1-e190037_3, 2022.

English Article Announcement of new Editorial Board members
Haruki Nakamura
Biophysics and Physicobiology 19: e190038_1-e190038_1, 2022.

English Article Tackle "Molecular Engine" by early-career researchers
Akihiro Otomo1,2, Takahiro Kosugi3,4,5,6
Biophysics and Physicobiology 19: e190039_1-e190039_3, 2022.

English Article Investigation on substrate specificity and catalytic activity of serine protease neuropsin
Masami Lintuluoto1, Mitsumasa Abe1, Yota Horioka1, Yoshifumi Fukunishi2, Hideki Tamura3,4, Juha M.Lintuluoto5
Biophysics and Physicobiology 19: e190040_1-e190040_14, 2022.

English Article Influence of gap junctions upon Ca2+ propagation from stimulated keratinocytes to DRG neurons
Chiaki Seto1, Kenta Toyoda1, Kousuke Inada1, Kotaro Oka2,3,4, Etsuro Ito1,3,4
Biophysics and Physicobiology 19: e190041_1-e190041_10, 2022.

English Article Announcement of BPPB paper awards 2022
Haruki Nakamura
Biophysics and Physicobiology 19: e190042_1-e190042_1, 2022.

English Article Creation of supramolecular biomembrane by the bottom-up self-assembly : Where material science meets biophysics
Kazuma Yasuhara1,2, Kenichi Morigaki3,4
Biophysics and Physicobiology 19: e190043_1-e190043_5, 2022.

English Article Physico- and chemical biology using nanomanipulation and micromanipulation technologies
Akira Kitamura1,2, Ryo Iizuka3
Biophysics and Physicobiology 19: e190044_1-e190044_3, 2022.

English Article Development of the force field for cyclosporine A
Tsutomu Yamane1,2, Toru Ekimoto1, Mitsunori Ikeguchi1,2
Biophysics and Physicobiology 19: e190045_1-e190045_12, 2022.

English Article Activation mechanism of the bacterial flagellar dual-fuel protein export engine
Tohru Minamino1, Miki Kinoshita1, Yusuke V.Morimoto2,3, Keiichi Namba1,4,5
Biophysics and Physicobiology 19: e190046_1-e190046_13, 2022.

English Article Live-cell imaging of bio-metal species
Tasuku Hirayama1, Koichiro Ishimori2
Biophysics and Physicobiology 19: e190047_1-e190047_3, 2022.

English Article Intestinal and optic-cup organoids as tools for unveiling mechanics of self-organizing morphogenesis
Sristilekha Nath, Satoshi Toda, Satoru Okuda
Biophysics and Physicobiology 19: e190048_1-e190048_11, 2022.